FindFull Text keeps interrupting my other work

This is rather a How Not To question.
I am doing a Find Full Text search of references I have just downloaded. In theory I should be able to continue working while I am doing this. However, like a little boy wanting to show off to its paqrents what he can do, Endnote keeps popping up in front of any non-Endnote document I am using (like typing this message, where I have had to stop countless times) every time it finds a new reference, so I cannot really do anything else. I have to manually minimise Endnote each time to return to my working document. Is there a way to stop this infuriating behaviour? It is a monumental waste of time